id: 5-2560.0-2570.r2570/0
type: file
pred: 5-2560.0-2490.r2567/54885
count: 3
text: 2567 7237 20 5811 399dc24e4ef8dd193565b5f03b1167c6 46f8fa452392e831ea065b728bb19964a83e8865 2566-1za/_p
cpath: /sassie_docs/advanced_topics/edler/polymer_parameterization/files/preliminary_sma.str
copyfrom: 2569 /sassie_docs/advanced_topics/edler/polymer_parameterization/files/sma.str

PLAIN
K 28
CHARMM_FF_Mackerell4.pdf.zip
V 27
file 4-2471.0.r2471/7246512
K 24
build_system_bmal.psfgen
V 31
file 5-2564.0-2490.r2564/942723
K 24
build_system_esty.psfgen
V 26
file 5-2562.0-2566.r2566/0
K 8
dyn0.inp
V 31
file 5-2561.0-2490.r2564/943118
K 8
dyn0.out
V 31
file 9-2564.0-2490.r2564/943473
K 12
minimize.inp
V 23
file 4-2467.0.r2467/420
K 7
mol2crd
V 23
file 4-2468.0.r2468/478
K 8
msm.mol2
V 29
file 5-2556.0-2490.r2568/4650
K 7
msm.str
V 29
file 8-2556.0-2490.r2568/5004
K 12
msm_init.crd
V 29
file d-2567.0-2490.r2568/5359
K 12
msm_init.pdb
V 29
file f-2567.0-2490.r2568/5720
K 11
msm_min.pdb
V 29
file a-2556.0-2490.r2568/6080
K 8
mss.mol2
V 30
file c-2556.0-2490.r2567/53152
K 7
mss.str
V 30
file e-2556.0-2490.r2567/53510
K 12
mss_init.crd
V 30
file k-2567.0-2490.r2567/53866
K 12
mss_init.pdb
V 30
file m-2567.0-2490.r2567/54196
K 11
mss_min.pdb
V 30
file g-2556.0-2490.r2567/54525
K 6
output
V 27
dir 5-2559.0-2490.r2565/617
K 15
output_building
V 30
dir 5-2558.0-2490.r2564/951076
K 20
par_all36_cgenff.prm
V 25
file 4-2469.0.r2469/81998
K 19
preliminary_sma.str
V 26
file 5-2560.0-2570.r2570/0
K 7
sm.mol2
V 26
file 4-2478.0.r2478/929736
K 6
sm.out
V 26
file 4-2479.0.r2479/117244
K 6
sm.str
V 26
file 7-2478.0.r2479/117471
K 11
sm_init.crd
V 26
file 8-2479.0.r2479/117726
K 11
sm_init.pdb
V 26
file a-2479.0.r2479/117959
K 10
sm_min.crd
V 26
file c-2479.0.r2479/118192
K 10
sm_min.pdb
V 26
file e-2479.0.r2479/118425
K 11
sm_temp.crd
V 26
file g-2479.0.r2479/118657
K 8
sms.mol2
V 30
file i-2556.0-2490.r2567/55241
K 7
sms.str
V 30
file k-2556.0-2490.r2567/55599
K 11
sms_m2.mol2
V 30
file s-2567.0-2490.r2567/55955
K 10
sms_m2.out
V 30
file u-2567.0-2490.r2567/56284
K 10
sms_m2.str
V 30
file w-2567.0-2490.r2567/56614
K 15
sms_m2_init.crd
V 30
file y-2567.0-2490.r2567/56943
K 15
sms_m2_init.pdb
V 31
file 10-2567.0-2490.r2567/57277
K 14
sms_m2_min.crd
V 31
file 12-2567.0-2490.r2567/57612
K 14
sms_m2_min.pdb
V 31
file 14-2567.0-2490.r2567/57947
K 15
sms_m2_temp.crd
V 31
file 16-2567.0-2490.r2567/58281
K 11
sms_min.pdb
V 30
file m-2556.0-2490.r2567/58616
K 8
ssm.mol2
V 30
file o-2556.0-2490.r2567/58978
K 7
ssm.str
V 30
file q-2556.0-2490.r2567/59338
K 12
ssm_init.crd
V 31
file 1b-2567.0-2490.r2567/59696
K 12
ssm_init.pdb
V 31
file 1d-2567.0-2490.r2567/60029
K 11
ssm_min.pdb
V 30
file s-2556.0-2490.r2567/60361
K 8
sss.mol2
V 30
file u-2556.0-2490.r2567/60723
K 7
sss.str
V 30
file w-2556.0-2490.r2567/61083
K 12
sss_init.crd
V 31
file 1i-2567.0-2490.r2567/61441
K 12
sss_init.pdb
V 31
file 1k-2567.0-2490.r2567/61774
K 11
sss_min.pdb
V 30
file y-2556.0-2490.r2567/62106
K 20
top_all36_cgenff.rtf
V 26
file 4-2470.0.r2470/219945
END
ENDREP
id: 3-2466.0-2490.r2570/3043
type: dir
pred: 3-2466.0-2490.r2568/9102
count: 20
text: 2570 371 2659 0 14f6fbb3bc8772c5311496417c24715e
cpath: /sassie_docs/advanced_topics/edler/polymer_parameterization/files
copyroot: 2490 /sassie_docs/advanced_topics/edler/polymer_parameterization/files

PLAIN
K 15
cgenff_tutorial
V 29
dir 4-2563.0-2489.r2567/51514
K 5
files
V 28
dir 3-2466.0-2490.r2570/3043
K 6
images
V 28
dir 5-2454.1-2490.r2551/7034
K 8
sma.html
V 31
file a-2454.2-2490.r2569/354078
K 6
sma.md
V 31
file c-2454.3-2490.r2569/354435
K 7
sma.pdf
V 31
file e-2454.4-2490.r2550/165083
END
ENDREP
id: 5-2490.0-2489.r2570/3642
type: dir
pred: 5-2490.0-2489.r2569/355097
count: 20
text: 2570 3333 296 0 edcadff4563ff56b8ef4195b3ed0846a
cpath: /sassie_docs/advanced_topics/edler/polymer_parameterization
copyroot: 2489 /sassie_docs/advanced_topics

PLAIN
K 14
lipid_tutorial
V 30
dir 3-2490.0-2489.r2569/353835
K 24
polymer_parameterization
V 28
dir 5-2490.0-2489.r2570/3642
K 13
qm_validation
V 30
dir 9-2569.0-2489.r2569/357575
END
ENDREP
id: 3-2454.0-2489.r2570/4083
type: dir
pred: 3-2454.0-2489.r2569/357977
count: 74
text: 2570 3891 179 0 3ddb62516e10913fcfccdebe1807f2e6
cpath: /sassie_docs/advanced_topics/edler
copyroot: 2489 /sassie_docs/advanced_topics

PLAIN
K 5
edler
V 28
dir 3-2454.0-2489.r2570/4083
K 5
files
V 24
dir g-2454.0.r2454/49325
K 6
images
V 24
dir h-2454.0.r2454/49427
K 13
projects.html
V 25
file i-2454.0.r2454/49530
K 11
projects.md
V 25
file k-2454.0.r2454/49754
K 10
references
V 24
dir m-2454.0.r2454/49974
K 5
russo
V 24
dir n-2454.0.r2454/50982
END
ENDREP
id: 1-2454.0-2489.r2570/4633
type: dir
pred: 1-2454.0-2489.r2569/358532
count: 75
text: 2570 4307 313 0 f552dde8f4417a943fea2838089a0255
cpath: /sassie_docs/advanced_topics
copyroot: 2489 /sassie_docs/advanced_topics

PLAIN
K 15
advanced_topics
V 28
dir 1-2454.0-2489.r2570/4633
K 7
analyze
V 24
dir 1-1966.0.r2439/93668
K 5
build
V 24
dir 8-1966.0.r2410/23704
K 9
calculate
V 23
dir c-1966.0.r2522/6194
K 11
constraints
V 24
dir 1-2024.0.r2346/38923
K 9
graveyard
V 22
dir 1-2023.0.r2203/401
K 8
interact
V 24
dir j-1966.0.r2057/16794
K 8
overview
V 25
dir m-1966.0.r2488/135731
K 10
references
V 23
dir 1-2032.0.r2276/2497
K 17
sample_work_flows
V 24
dir a-2024.0.r2057/18754
K 10
sassie-web
V 24
dir 7-1965.0.r2439/94858
K 22
sassie-web-quick-start
V 25
dir 1-2120.0.r2421/849050
K 16
sassie_docs.html
V 31
file 2-1970.0-1972.r2488/135905
K 14
sassie_docs.md
V 31
file 2-1971.1-1972.r2488/136182
K 15
sassie_docs.pdf
V 26
file 4-1975.0.r2488/136455
K 18
sassie_stand_alone
V 29
dir w-1966.0-1975.r2057/20285
K 16
sassie_style.txt
V 26
file 1-1978.0.r2270/270587
K 8
simulate
V 25
dir n-1966.0.r2488/139806
K 27
structures_and_force_fields
V 24
dir x-1966.0.r2057/21803
K 5
tools
V 25
dir y-1966.0.r2382/668277
K 3
vmd
V 22
dir j-2024.0.r2396/998
K 13
vmd-vignettes
V 25
dir 4-2294.0.r2294/447717
END
ENDREP
id: 6-1965.0.r2570/5943
type: dir
pred: 6-1965.0.r2569/359847
count: 369
text: 2570 4851 1079 0 3d61f0a9ab765e637612577195dda22e
cpath: /sassie_docs
copyroot: 0 /

PLAIN
K 6
README
V 20
file 0-52.0.r1653/43
K 18
core_libraries_1.0
V 23
dir 0-1894.0.r2210/2126
K 16
ncnr_development
V 26
dir 0-1944.0.r1949/1027527
K 6
papers
V 28
dir 1-1525.0-1526.r2486/4569
K 11
sassie_0.98
V 18
dir 0-39.0.r42/385
K 10
sassie_1.0
V 21
dir 0-29.0.r2533/5569
K 10
sassie_2.0
V 21
dir 0-44.0.r2555/5870
K 11
sassie_docs
V 23
dir 6-1965.0.r2570/5943
K 8
training
V 26
dir 0-2384.0.r2549/2499551
END
ENDREP
id: 0.0.r2570/6531
type: dir
pred: 0.0.r2569/360440
count: 2570
text: 2570 6107 411 0 2eb166cfdcf57a942f0bf6d264fb36b2
cpath: /
copyroot: 0 /

5-2560._0.t2569-1zd add-file false false /sassie_docs/advanced_topics/edler/polymer_parameterization/files/preliminary_sma.str
2569 /sassie_docs/advanced_topics/edler/polymer_parameterization/files/sma.str
5-2560.0-2490.r2567/54885 delete-file false false /sassie_docs/advanced_topics/edler/polymer_parameterization/files/sma.str


6531 6674